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chromatin isolation by RNA purification sequencing assay

Go to external page http://purl.obolibrary.org/obo/OBI_0002040

A detection of specific nucleic acids with complementary probes assay that measures regions of the genome which are bound by a specific RNA (or a by a ribonucleoprotein containing the RNA of interest) using high-throughput sequencing.

Term info

Label

chromatin isolation by RNA purification sequencing assay

alternative term

ChIRP-seq, Chromatin Isolation by RNA purification, ChIRP-seq assay

definition source

PMID:21963238

editor preferred term

chromatin isolation by RNA purification sequencing assay

example of usage

Csorba et al., (November 2014). "Antisense COOLAIR mediates the coordinated switching of chromatin states at FLC during vernalization." Proc Natl Acad Sci 111(45):16160-5. doi: 10.1073/pnas.1419030111.

has curation status

http://purl.obolibrary.org/obo/IAO_0000120

term editor

Venkat Malladi, Chris Stoeckert, Jie Zheng